| MirGeneDB ID | Esc-Novel-8 |
|---|
| Family name |
ESC-NOVEL-8 (all species) |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
|
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| Node of Origin (locus) |
E. scolopes
|
|---|
| Node of Origin (family) |
E. scolopes
|
|---|
Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044510.1: 53988920-53988979 [+]
Ensembl
|
|---|
| Seed |
UCCAGAU |
|---|
Precursor
(pre-Mir +30nt flank) |
CGAUAUAUCGACGUAUUCCAUGCAUCGCCGAUCCAGAUGUCAGGCUGGUCCUAUAAAGAAUACCACUGGAAAGUCUCCCAUCUCGGGUCGAAAUGCGUGGAACAAGCAGCGAUUGAAAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGAUAUAUCGACGUAUU---| CGC - UC GG UAUAAAG
CCAUGCAU CGAUCC AGAUG AGGCU UCC A
GGUGCGUA GCUGGG UCUAC UCUGA AGG A
UAAAAGUUAGCGACGAACAA^ AA- C CC A- UCACCAU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Mature sequence |
Esc-Novel-8_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUCCAGAUGUCAGGCUGGUCCU -22
Get sequence
|
|---|
| Star sequence |
Esc-Novel-8_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- GGAAAGUCUCCCAUCUCGGGUCG -60
Get sequence
|
|---|
