| MirGeneDB ID | Ete-Mir-9851 |
| Family name |
MIR-9851 (all species) |
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-9851
Cfa-Mir-9851
Eca-Mir-9851
Hsa-Mir-9851
Laf-Mir-9851
Mml-Mir-9851
Mmr-Mir-9851
Ocu-Mir-9851
Pab-Mir-9851
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980301: 12629599-12629655 [+]
UCSC
|
| Seed |
GCCGGCA |
Precursor (pre-Mir +30nt flank) |
CAGCAGUGGCAGCAGAGGCGGUGAGCCCGGCGCCGGCAGUGUUGGUGGCACCUGCGUGGUGGCGGUGGCACCAGUACUGGCGGUGGCGGUGGCACCAGCACUGGCAGCACCUGUUCG
Get precursor sequence
|
| Structure | 10 20 30 40 50
CAGCAGUGGCAGCAGAG- -| AGC G G G UGCGU
GC GGUG CCG CGCCG CAGUGUUGGUG CACC \
CG CCAC GGC GUGGC GUCAUGACCAC GUGG G
GCUUGUCCACGACGGUCA A^ GGU G G G CGGUG
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
| Mature sequence |
Ete-Mir-9851_5p |
| mirBase accession | None |
| Sequence |
0- CGCCGGCAGUGUUGGUGGCACC -22
Get sequence
|
| Star sequence |
Ete-Mir-9851_3p* |
| mirBase accession | None |
| Sequence |
35- UGGCACCAGUACUGGCGGUGGC -57
Get sequence
|