| MirGeneDB ID | Gga-Mir-10585 |
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| Family name |
MIR-10585 (all species) |
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| Species |
Chicken (Gallus gallus) |
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| MiRBase ID |
gga-mir-10585
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
G. gallus
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| Node of Origin (family) |
G. gallus
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Genome context
(Gallus_gallus.GRCg6a) |
2: 473003-473062 [+]
UCSC
Ensembl
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| Seed |
GAUGAAA |
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Precursor
(pre-Mir +30nt flank) |
UGGAGGUGCGGGGUGGUGGCAGGAGAUGUCUGAUGAAAUCCCCCUAUGGCCUGUUUGUGAUGGUACCGCAGGAUAGGUGGGUUUCAUUGAAUGUCUGUGCCACAUGGCGACGGUGCCGCC
Get precursor sequence
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| Structure | 10 20 30 40 50 60
UGGAGGUGCGGGGUGGU--| GG CU C GG UUGUGA
GGCA AGAUGU GAUGAAAUCC CCUAU CCUGU \
CCGU UCUGUA UUACUUUGGG GGAUA GGACG U
CCGCCGUGGCAGCGGUACA^ G- AG U -- CCAUGG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ad |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Gg |
He |
He |
Hy |
Hy |
Ki |
Ki |
Li |
Li |
Lu |
Lu |
Ov |
Pr |
Pr |
Sc |
Sc |
Sp |
Sp |
Te |
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| Mature sequence |
Gga-Mir-10585_5p |
| mirBase accession | MIMAT0049964 |
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| Sequence |
0- UGAUGAAAUCCCCCUAUGGCCUGU -24
Get sequence
|
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| Star sequence |
Gga-Mir-10585_3p* |
| mirBase accession | MIMAT0049965 |
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| Sequence |
39- AGGAUAGGUGGGUUUCAUUGA -60
Get sequence
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