| MirGeneDB ID | Gmo-Mir-723-P2 |
|---|
| Family name |
MIR-723 (all species) |
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| Species |
Cod (Gadus morhua) |
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| MiRBase ID |
gmo-mir-723-1
|
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| Paralogues |
Gmo-Mir-723-P1
|
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| Orthologues |
Dre-Mir-723-P2
Mal-Mir-723-P2
Tni-Mir-723-P2
|
|---|
| Node of Origin (locus) |
Clupeocephala
|
|---|
| Node of Origin (family) |
Clupeocephala
|
|---|
Genome context
(Gadus_morhua.gadMor1.dna.toplevel) |
GeneScaffold_830: 246018-246077 [-]
UCSC
Ensembl
|
|---|
| Seed |
GACAUCA |
|---|
Precursor
(pre-Mir +30nt flank) |
AGCACCGGGGACGAUAGAGUUACGGAUAAAGGCAGUUUUUAAUGAUGUUACUUCUUUUUACUCAUAGAAGACAUCAGAUAAAUCUGUGCUUAUCCUUGCUCAUGAAACGAUGCCCUCCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGCACCGGGGACGAUAG---| UAC AG U UAA UA UUUUU
AGU GGAUAA GCAG UUU UGAUGU CUUC A
UCG CCUAUU UGUC AAA ACUACA GAAG C
CUCCUCCCGUAGCAAAGUAC^ UU- CG U UAG -- AUACU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Gmo-Mir-723-P2_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGCAGUUUUUAAUGAUGUUACUUC -24
Get sequence
|
|---|
| Mature sequence |
Gmo-Mir-723-P2_3p |
| mirBase accession | MIMAT0044007 |
|---|
| Sequence |
38- AGACAUCAGAUAAAUCUGUGCU -60
Get sequence
|
|---|
