| MirGeneDB ID | Gpa-Mir-284 |
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| Family name |
MIR-284 (all species) |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Dan-Mir-284
Dme-Mir-284
Dmo-Mir-284
Dsi-Mir-284
Dya-Mir-284
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| Node of Origin (locus) |
Glossinidae + Drosophilidae
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| Node of Origin (family) |
Glossinidae + Drosophilidae
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Genome context
(GpalI1) |
Scaffold36: 918599-918678 [+]
Ensembl
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| Seed |
CUGGAAU |
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Precursor
(pre-Mir +30nt flank) |
CUCAAGAGCUCAAGGAGUGUGUUUGCUAUUCCUGGAAUUAAGUUGACUGUGCAGCCUCUUUCCGCAUGGCUUGUGCUCAGCAAUCAAAGUCAGCAACUUGAUUCCAGCAAUUGCGGUCAUACACAAACAGCGCUAAAAUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60 70
CUCAAGAGCUCAAGGAG--| U U C A U AGCCUCUUUCCGCAUGG
UGUG UUGC AUU CUGGAAUUAAGUUG CUG GC C
AUAC GGCG UAA GACCUUAGUUCAAC GAC UG U
GUAAAAUCGCGACAAACAC^ U U C - - AAACUAACGACUCGUGU
. 130 120 110 100 90 80 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Gpa-Mir-284_5p |
| mirBase accession | None |
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| Sequence |
0- CCUGGAAUUAAGUUGACUGUGCAG -24
Get sequence
|
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| Star sequence |
Gpa-Mir-284_3p* |
| mirBase accession | None |
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| Sequence |
58- GUCAGCAACUUGAUUCCAGCAA -80
Get sequence
|
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