| MirGeneDB ID | Gpa-Mir-987 |
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| Family name |
MIR-987 (all species) |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Dan-Mir-987
Dme-Mir-987
Dmo-Mir-987
Dsi-Mir-987
Dya-Mir-987
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| Node of Origin (locus) |
Glossinidae + Drosophilidae
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| Node of Origin (family) |
Glossinidae + Drosophilidae
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Genome context
(GpalI1) |
Scaffold323: 87572-87636 [+]
Ensembl
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| Seed |
AAAGUAA |
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Precursor
(pre-Mir +30nt flank) |
GCGUAAAACGUUCAAAUGGUAAAUUGUAUUUAAAGUAAAUAGUCUGGAUUGAUGAAUGGAUUUCAAAGAUUUCAUCACCAGACAUUUACUUCAACUGCAGUUUCAACCAAAGUGCAACAAAUUGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCGUAAAACGUUCAAAUGGU--| U A A AU AAUGGAUU
AAAUUGUA UU AAGUAAAU GUCUGG UGAUG U
UUUGACGU AA UUCAUUUA CAGACC ACUAC C
AGUUAAACAACGUGAAACCAAC^ C C - -- UUUAGAAA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Mature sequence |
Gpa-Mir-987_5p |
| mirBase accession | None |
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| Sequence |
0- UAAAGUAAAUAGUCUGGAUUGAUG -24
Get sequence
|
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| Star sequence |
Gpa-Mir-987_3p* |
| mirBase accession | None |
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| Sequence |
43- AUCACCAGACAUUUACUUCAAC -65
Get sequence
|
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