| MirGeneDB ID | Hme-Mir-10485 |
|---|
| Family name |
MIR-10485 (all species) |
|---|
| Species |
Longwing butterfly (Heliconius melpomene) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
H. melpomene
|
|---|
| Node of Origin (family) |
H. melpomene
|
|---|
Genome context
(Hmel_1) |
HE670498: 254375-254430 [+]
Ensembl
|
|---|
| Seed |
CAGUCUA |
|---|
Precursor
(pre-Mir +30nt flank) |
AUAAACUGAAGAAAAUUCGUCGCGAUCCGAACAGUCUACCCGGACAGGCCGACUUGCGCGCGUCGCCCUGCCCGGAUAGACAGUCCGGAUUGUAGACGCCGUUCGGCACUGGCCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUAAACUGAAGAAAAUU- -| A A C A C ACUUG
CGUC GCGAUCCG AC GUCUA CCGG CAGG CG C
GCAG UGUUAGGC UG CAGAU GGCC GUCC GC G
CUCCGGUCACGGCUUGCC A^ C A A C C UGCGC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Hme-Mir-10485_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACAGUCUACCCGGACAGGCCG -21
Get sequence
|
|---|
| Star sequence |
Hme-Mir-10485_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CCCUGCCCGGAUAGACAGUCC -56
Get sequence
|
|---|
