| MirGeneDB ID | Hme-Mir-6304 |
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| Family name |
MIR-6304 (all species) |
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| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
hme-mir-6304
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
H. melpomene
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| Node of Origin (family) |
H. melpomene
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Genome context
(Hmel_1) |
HE670412: 210116-210172 [+]
Ensembl
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| Seed |
UUCCAGU |
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Precursor
(pre-Mir +30nt flank) |
CAACAACGCUACAUGAUGUCUAUUCACAUUAUUCCAGUGUCGAUCAAGUACUAGACUAAAAUUAGUACUAGAACGGGGCUGGGUCGAUGUGGGUGUGAUGCUACUCCUUAUUAACAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAACAACGCUACAUGAU- -| AU G A A AGACU
GUC UAUUCACAUU UCCAGU UCG UC AGUACU \
UAG GUGGGUGUAG GGGUCG GGC AG UCAUGA A
CACAAUUAUUCCUCAUCG U^ CU G A A UUAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There are Dicer cuts +1 +2 and +3 on the 3p arm. |
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Hme-Mir-6304_5p |
| mirBase accession | None |
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| Sequence |
0- AUUCCAGUGUCGAUCAAGUACU -22
Get sequence
|
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| Star sequence |
Hme-Mir-6304_3p* |
| mirBase accession | MIMAT0025009 |
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| Sequence |
35- UACUAGAACGGGGCUGGGUCGA -57
Get sequence
|
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