| MirGeneDB ID | Hme-Mir-6305 |
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| Family name |
MIR-6305 (all species) |
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| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
hme-mir-6305
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
H. melpomene
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| Node of Origin (family) |
H. melpomene
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Genome context
(Hmel_1) |
HE670942: 235843-235906 [-]
Ensembl
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| Seed |
UAUGCUA |
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Precursor
(pre-Mir +30nt flank) |
CCUUCAUAGAAAUUUUUAUAGGAGAGAGUUGUAUGCUAGACUUUUUUACAUAUGUAAGAAAGUAUACUUAUAUGUGAGAAAUUCUAGCAGAUGACUUUCUACUAUACCUCAAUGGACUAUGAGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CCUUCAUAGAAAUUUUU--| G UG A C UGUAAGAA
AUAG AGAGAGU U UGCUAGA UUUUUUACAUA A
UAUC UCUUUCA A ACGAUCU AAAGAGUGUAU G
AGAGUAUCAGGUAACUCCA^ A GU G U AUUCAUAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There are Dicer cuts +1 +2 and +3 on the 3p arm. |
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Mature sequence |
Hme-Mir-6305_5p |
| mirBase accession | MIMAT0025010 |
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| Sequence |
0- GUAUGCUAGACUUUUUUACAUA -22
Get sequence
|
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| Star sequence |
Hme-Mir-6305_3p* |
| mirBase accession | MIMAT0025011 |
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| Sequence |
42- UGUGAGAAAUUCUAGCAGAUGA -64
Get sequence
|
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