| MirGeneDB ID | Hme-Novel-7 |
|---|
| Family name |
HME-NOVEL-7 (all species) |
|---|
| Species |
Longwing butterfly (Heliconius melpomene) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
H. melpomene
|
|---|
| Node of Origin (family) |
H. melpomene
|
|---|
Genome context
(Hmel_1) |
HE672065: 650060-650136 [-]
Ensembl
|
|---|
| Seed |
UGCGUUG |
|---|
Precursor
(pre-Mir +30nt flank) |
GCGAGGUGAUAUACGGCGUGCCGCAGGGGAGUGUCCUUGGUCCAACGCUAUUCUUAAUAUAUAUUAAUGAAUUGUGUAAUCUUGAAUGCGUUGGGGGAAGGAUAUUCUCUUAUGCGGAUGACACUGCCAUAGUAUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCGAGGUGAUAUACGGCGUG --| GG U UUAAUAUAUAUUAA
CCGCA GGGGAGUGUCCUU UCCAACGC AUUC U
GGCGU UCUCUUAUAGGAA GGGUUGCG UAAG G
CUUAUGAUACCGUCACAGUA AU^ GG - UUCUAAUGUGUUAA
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Hme-Novel-7_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GUGUCCUUGGUCCAACGCUAUUC -23
Get sequence
|
|---|
| Mature sequence |
Hme-Novel-7_3p |
| mirBase accession | None |
|---|
| Sequence |
55- AUGCGUUGGGGGAAGGAUAUUC -77
Get sequence
|
|---|
