| MirGeneDB ID | Laf-Novel-1 |
|---|
| Family name |
LAF-NOVEL-1 (all species) |
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| Species |
African bush elephant (Loxodonta africana) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
L. africana
|
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| Node of Origin (family) |
L. africana
|
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Genome context
(GCA_000001905.1_Loxafr3.0) |
GL010100.1: 2231395-2231452 [+]
UCSC
Ensembl
|
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| Seed |
GGAGUCA |
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Precursor
(pre-Mir +30nt flank) |
AACAACUAUAAAUUGCUAAUUAUUGGCACCAGGAGUCAAAACCAGGUCCUGCCUGGUCCGAAUUGCAGGACCUGAUUUUGACUCCUGGUGCCAUUGUUUACUAGCUAUGUGACCUUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AACAACUAUAAAUUGCUAAUUAU--| C CUGGU
UGGCACCAGGAGUCAAAA CAGGUCCUGC C
ACCGUGGUCCUCAGUUUU GUCCAGGACG C
ACUUCCAGUGUAUCGAUCAUUUGUU^ A UUAAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Laf-Novel-1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGGAGUCAAAACCAGGUCCUGC -22
Get sequence
|
|---|
| Co-mature sequence |
Laf-Novel-1_3p |
| mirBase accession | None |
|---|
| Sequence |
36- AGGACCUGAUUUUGACUCCUGG -58
Get sequence
|
|---|
