| MirGeneDB ID | Mal-Novel-5 |
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| Family name |
MAL-NOVEL-5 (all species) |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. albus
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| Node of Origin (family) |
M. albus
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884782.1: 2029168-2029225 [-]
UCSC
Ensembl
|
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| Seed |
AAAGUUA |
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Precursor
(pre-Mir +30nt flank) |
UGCCUUUCCACUCUGCAUGUACUACCAGUCAAAAGUUAGGACAUACUUACCCUUUGAAUUGAAUGGGAAGGUGUGUCCAAACUUUUGACUGGUGCAUGUGAUGCCACUGUUCACUCAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGCCUUUCCACUCUGCAUGUAC--| A A UUUGA
UACCAGUCAAAAGUU GGACAUACUU CCC A
GUGGUCAGUUUUCAA CCUGUGUGGA GGG U
UACUCACUUGUCACCGUAGUGUAC^ A A UAAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Mal-Novel-5_5p |
| mirBase accession | None |
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| Sequence |
0- AAAAGUUAGGACAUACUUACCC -22
Get sequence
|
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| Star sequence |
Mal-Novel-5_3p* |
| mirBase accession | None |
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| Sequence |
36- GAAGGUGUGUCCAAACUUUUGA -58
Get sequence
|
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