| MirGeneDB ID | Mdo-Mir-7244 |
| Family name |
MIR-7244 (all species) |
| Species |
Gray short-tailed opossum (Monodelphis domestica) |
| MiRBase ID |
mdo-mir-7244
|
| Paralogues |
|
| Orthologues |
|
| Node of Origin (locus) |
M. domestica
|
| Node of Origin (family) |
M. domestica
|
Genome context (monDom5_add) |
1: 553093580-553093636 [-]
UCSC
Ensembl
|
| Seed |
AUGGGAA |
Precursor (pre-Mir +30nt flank) |
AUGCGAACUAUUUAGAUGAUAUAUUUUAAAUAUGGGAAAAGCAGGUGAAAAUGUGAUAUGUAUUUUUUCACCUGUUCUUCCUAUAUUUAAAAAUGUCAUGAAGCAUCUACAGCUUUA
Get precursor sequence
|
| Structure | 10 20 30 40 50
AUGCGAACUAUUUAGAU---| A A UGUGAU
GAUAU UUUUAAAUAUGGGAA AGCAGGUGAAAA \
CUGUA AAAAUUUAUAUCCUU UUGUCCACUUUU A
AUUUCGACAUCUACGAAGUA^ - C UUAUGU
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
| Mature sequence |
Mdo-Mir-7244_5p |
| mirBase accession | MIMAT0028454 |
| Sequence |
0- UAUGGGAAAAGCAGGUGAAAAU -22
Get sequence
|
| Proposed targets |
TargetScanVert: mdo-miR-7244-5p
|
| Star sequence |
Mdo-Mir-7244_3p* |
| mirBase accession | MIMAT0028455 |
| Sequence |
35- UUUCACCUGUUCUUCCUAUAUU -57
Get sequence
|
| Proposed targets |
TargetScanVert: mdo-miR-7244-3p
|