| MirGeneDB ID | Mdo-Mir-7270 |
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| Family name |
MIR-7270 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7270
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. domestica
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| Node of Origin (family) |
M. domestica
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Genome context
(monDom5_add) |
2: 541551024-541551080 [-]
UCSC
Ensembl
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| Seed |
AAGAUCA |
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Precursor
(pre-Mir +30nt flank) |
AGGAAGCUAAGGAAAACGAGUGAUUUGCCUUAAGAUCACAGAGUCUGAAGAGUCUGAAACCUGACUCCAGGUCUGGUGUGAUCUUGUGCAAGUCACUUAACCUCUUCAGUUUUCUGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGGAAGCUAAGGAAAAC-- CU G- -| AA CUGA
GAGUGAUUUGC UAAGAUCACA AG UCUG GAGU A
UUCACUGAACG GUUCUAGUGU UC GGAC CUCA A
UGUCUUUUGACUUCUCCAA U- GG U^ -- GUCC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Mdo-Mir-7270_5p |
| mirBase accession | MIMAT0028510 |
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| Sequence |
0- UAAGAUCACAGAGUCUGAAGAGU -23
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7270-5p
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| Star sequence |
Mdo-Mir-7270_3p* |
| mirBase accession | MIMAT0028511 |
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| Sequence |
35- UCCAGGUCUGGUGUGAUCUUGU -57
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7270-3p
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