| MirGeneDB ID | Mdo-Mir-7277 |
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| Family name |
MIR-7277 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7277
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. domestica
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| Node of Origin (family) |
M. domestica
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Genome context
(monDom5_add) |
1: 48274735-48274798 [-]
UCSC
Ensembl
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| Seed |
GGGGCAG |
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Precursor
(pre-Mir +30nt flank) |
UCGGCUUGGCAUCUCCAGGGUCCUCGUCUCUCCUGGUCCUCUCGCUGCCCCCUGCCUGAGCACGUCUGCUGGCGGGGCAGAGAUGACCAGGGGAGGUGCUGGCCCGAGCUCUGCUCCUGGGCCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UCGGCUUGGCAUCUCCA--| CU GU C GC - GCCUGAGC
GGGUC C CUCUCCUGGUC UCUC UGCCCC CU \
CCCGG G GAGGGGACCAG AGAG ACGGGG GG A
ACCGGGUCCUCGUCUCGAG^ UC UG U -- C UCGUCUGC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Mdo-Mir-7277_5p* |
| mirBase accession | MIMAT0028528 |
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| Sequence |
0- UCCUGGUCCUCUCGCUGCCCCCUG -24
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7277-5p
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| Mature sequence |
Mdo-Mir-7277_3p |
| mirBase accession | MIMAT0028529 |
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| Sequence |
42- CGGGGCAGAGAUGACCAGGGGA -64
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7277-3p
|
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