| MirGeneDB ID | Mml-Mir-3173 |
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| Family name |
MIR-3173 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-3173
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| Paralogues |
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| Orthologues |
Cja-Mir-3173
Hsa-Mir-3173
Pab-Mir-3173
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| Node of Origin (locus) |
Simiiformes
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| Node of Origin (family) |
Simiiformes
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014342.1: 157325189-157325249 [-]
UCSC
Ensembl
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| Seed |
AGGAGGA |
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Precursor
(pre-Mir +30nt flank) |
UAGAAUUUGUUGGUCUUGGGCCAGCUUCCCUGCCCUGCCUGUUUUCUUCUUUGUGGUUUUAUGAAAGCGAAGGAGGAAACAGGCAGGCCAGGGAAGCGCUCUCUACCUCCCUCGCUGUCUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UAGAAUUUGUUGGUCUU---| CA C UGGUUU
GGGC GCUUCCCUG CCUGCCUGUUUUCUUCUUUG U
CUCG CGAAGGGAC GGACGGACAAAGGAGGAAGC A
UUCUGUCGCUCCCUCCAUCU^ -- C GAAAGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-3173_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- UGCCCUGCCUGUUUUCUUCUUUG -23
Get sequence
|
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| Mature sequence |
Mml-Mir-3173_3p |
| mirBase accession | MIMAT0024331 |
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| Sequence |
39- AAGGAGGAAACAGGCAGGCCAG -61
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-3173
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