| MirGeneDB ID | Mmr-Mir-598 |
|---|
| Family name |
MIR-598 (all species) |
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| Species |
Gray mouse lemur (Microcebus murinus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Cja-Mir-598
Cpo-Mir-598
Ete-Mir-598
Hsa-Mir-598
Laf-Mir-598
Mml-Mir-598
Mmu-Mir-598
Pab-Mir-598
Rno-Mir-598-P1
Rno-Mir-598-P2
|
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007680.1: 14924810-14924868 [+]
UCSC
Ensembl
|
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| Seed |
ACGUCAU |
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Precursor
(pre-Mir +30nt flank) |
GAGGAUGGCUUGACGAUGCUGCUGAUGCUGGCGGUGACACCGAUGGCGUGAGCUGGAGACAGGGUGCUACGUCAUCGUUGUCAUCGUCAUCAUCAUCACCCGAGCAGCCACCAGUGCGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GAGGAUGGCUUGACGAUGC--| C C C G UGGAG
UG UGAUG UGGCGGUGACA CGAUGGCGU AGC A
AC ACUAC ACUGCUACUGU GCUACUGCA UCG C
GGCGUGACCACCGACGAGCCC^ U U U - UGGGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Mmr-Mir-598_5p* |
| mirBase accession | None |
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| Sequence |
0- GCGGUGACACCGAUGGCGUGAGC -23
Get sequence
|
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| Mature sequence |
Mmr-Mir-598_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UACGUCAUCGUUGUCAUCGUCA -59
Get sequence
|
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