| MirGeneDB ID | Mmr-Mir-877 |
| Family name |
MIR-877 (all species) |
| Species |
Gray mouse lemur (Microcebus murinus) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-877
Cfa-Mir-877
Cja-Mir-877
Ete-Mir-877
Hsa-Mir-877
Laf-Mir-877
Mml-Mir-877
Mmu-Mir-877
Pab-Mir-877
Rno-Mir-877
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007666.1: 682813-682896 [+]
UCSC
Ensembl
|
| Seed |
UAGAGGA |
Precursor (pre-Mir +30nt flank) |
GAUGACACAGCUGCCGAGAGGCUGGAGAAGGUAGAGGAGAUGGCGCAGGGGACACAGGUAAGACUUGGGGUUCUUGGGGCCCUUGAACAUGUGUCCUCUUCUCCCUCCUCCCAGGUGUACGAGGAAUUGCGGGCUACCGGGGCA
Get precursor sequence
|
| Structure | 10 20 30 40 50 60 70
GAUGACACAGCUGCCGAGAGG---------| A A U A UGGCGC CAGGUAAGACUUGGGGUU
CUGG GA GG AG GGAGA AGGGGACA \
GACC CU CC UC CCUCU UCUCCUGU C
ACGGGGCCAUCGGGCGUUAAGGAGCAUGUG^ - - - - ------ GUACAAGUUCCCGGGGUU
140 130 120 110 100 90 80 |
| Deep sequencing |
Go to detailed chart
|
| Comment | Mir-877 is a conserved mirtron cut at both ends by the spliceosome. |
| 3' NTU |
Yes
|
| Motifs | No |
Tissue expression
|
|
| Mature sequence |
Mmr-Mir-877_5p |
| mirBase accession | None |
| Sequence |
0- GUAGAGGAGAUGGCGCAGGGGACA -24
Get sequence
|
| Star sequence |
Mmr-Mir-877_3p* |
| mirBase accession | None |
| Sequence |
61- UGUCCUCUUCUCCCUCCUCCCAG -84
Get sequence
|