| MirGeneDB ID | Mmr-Novel-5 |
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| Family name |
MMR-NOVEL-5 (all species) |
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| Species |
Gray mouse lemur (Microcebus murinus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. murinus
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| Node of Origin (family) |
M. murinus
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Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007673.1: 17835021-17835084 [-]
UCSC
Ensembl
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| Seed |
AGGGAAC |
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Precursor
(pre-Mir +30nt flank) |
AAUUUGACAGUGAGGCUGCCCCAGAAAAUCUAGGGAACUGGAAUGUGAAGGCCUGGACCACUUUAAUAUGGGUCAUAUAUUCCAGUUCUCUUGCAUUUCUCAUGCCUAAUUCUUCCCCCUUUUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AAUUUGACAGUGAGGCU--| CCC AUCU AA UGGACCAC
GC AGAAA AGGGAACUGGAAUGUG GGCC \
CG UCUUU UCUCUUGACCUUAUAU CUGG U
GUUUUCCCCCUUCUUAAUC^ UAC ACGU A- GUAUAAUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Mmr-Novel-5_5p |
| mirBase accession | None |
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| Sequence |
0- UAGGGAACUGGAAUGUGAAGGCC -23
Get sequence
|
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| Star sequence |
Mmr-Novel-5_3p* |
| mirBase accession | None |
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| Sequence |
42- UCAUAUAUUCCAGUUCUCUUGC -64
Get sequence
|
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