MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-340

Family name MIR-340 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-340
Paralogues
Orthologues Bta-Mir-340  Cfa-Mir-340  Cja-Mir-340  Cpo-Mir-340  Dno-Mir-340  Eca-Mir-340  Ete-Mir-340  Hsa-Mir-340  Laf-Mir-340  Mml-Mir-340  Mmr-Mir-340  Ocu-Mir-340  Pab-Mir-340  Rno-Mir-340-P1  Rno-Mir-340-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr11: 50069720-50069784 [+] UCSC Ensembl
Seed UAUAAAG
Precursor
(pre-Mir +30nt flank)		 
GAUUUCUAAAACCAAUUGUACUUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUAACACCACAGAUCAUG
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Structure
        10          20        30        40         50        60 
GAUUUCUAAAACCAAUU--     U      AU       CAA-|     U    GUCAUAUG 
                   GUACU GGUGUG  UAUAAAG    UGAGAC GAUU        U
                   UAUGG CCAUAC  AUAUUUC    ACUCUG CUAG        C
GUACUAGACACCACAAUUC     U      CG       AUUG^     C    GGUGUUUG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-340_5p
mirBase accessionMIMAT0004651
Sequence 
0- UUAUAAAGCAAUGAGACUGAUU -22
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Proposed targets microrna.org: MIMAT0004651
TargetScanVert: mmu-miR-340-5p
miRDB: MIMAT0004651
Star sequence

Mmu-Mir-340_3p*
mirBase accessionMIMAT0000586
Sequence 
42- UCCGUCUCAGUUACUUUAUAGCC -65
Get sequence
Proposed targets microrna.org: MIMAT0000586
TargetScanVert: mmu-miR-340-3p
miRDB: MIMAT0000586