| MirGeneDB ID | Nag-Novel-2 |
|---|
| Family name |
NAG-NOVEL-2 (all species) |
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| Species |
Thorny-headed worm 1 (Neoechinorhynchus agilis) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
N.agilis
|
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| Node of Origin (family) |
N.agilis
|
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Genome context
(N_agilis_genome_min1000_bacfree) |
k149_2001: 1845-1902 [-]
Ensembl
|
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| Seed |
AAACUUA |
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Precursor
(pre-Mir +30nt flank) |
CUCUCAUCGUAUACUAGAAGGGACCUCUUCAGAAUCGCUUGUAAGUUUUCUACUAUGUAAGCAGUAGAAAACUUACAAACCAUUCUGAAGUUCAAUAUUGAGGAAAAAAUAUUAAAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUCUCAUCGUAUACUAGAAG-----| CUC CGC ACUAUG
GGAC UUCAGAAU UUGUAAGUUUUCU U
CUUG AAGUCUUA AACAUUCAAAAGA A
UAAAAUUAUAAAAAAGGAGUUAUAA^ --- CCA UGACGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Nag-Novel-2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGAAUCGCUUGUAAGUUUUCU -21
Get sequence
|
|---|
| Mature sequence |
Nag-Novel-2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AAAACUUACAAACCAUUCUGA -58
Get sequence
|
|---|
