| MirGeneDB ID | Neu-Mir-12468 |
|---|
| Family name |
MIR-12468 (all species) |
|---|
| Species |
Tammar Wallaby (Notamacropus eugenii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Mdo-Mir-12468
Sha-Mir-12468
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 215248758-215248813 [-]
UCSC
Ensembl
|
|---|
| Seed |
AGUAAUG |
|---|
Precursor
(pre-Mir +30nt flank) |
AUGAUGGAUGGCGAUCAAGGUGUGACUAUAAAGUAAUGAGAUUGAUUUCUGUGGUGUAGUAAAUGGAAAUCAGUUUCAUUACUUUACAGUCACAUCUAAUCUUCUACAAUGCUGUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUGAUGGAUGGCGAUCA--| A GGUG
AGGUGUGACU UAAAGUAAUGAGAUUGAUUUCUGU U
UCUACACUGA AUUUCAUUACUUUGACUAAAGGUA A
UUGUCGUAACAUCUUCUAA^ C AAUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Neu-Mir-12468_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAGUAAUGAGAUUGAUUUCUGU -22
Get sequence
|
|---|
| Star sequence |
Neu-Mir-12468_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
34- GGAAAUCAGUUUCAUUACUUUA -56
Get sequence
|
|---|
