| MirGeneDB ID | Neu-Mir-1547 |
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| Family name |
MIR-1547 (all species) |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mdo-Mir-1547
Sha-Mir-1547
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 125198594-125198654 [-]
UCSC
Ensembl
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| Seed |
AUCAGAG |
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Precursor
(pre-Mir +30nt flank) |
CCAUCCCCACUUGAUACAGAACGUAUGAUGUAUCAGAGUCUUGGGUCCUUGUGUAGAUGCUGUGAGACUUCAAGGAUCCCUGACUUGAUCAUUGUGGGUUCUCCCUUCACCGAUGCGGCUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CCAUCCCCACUUGAUAC--| G UG U G UU U- AGAUG
AGAAC UA AUG AUCA AGUC GGGUCCUUG GU C
UCUUG GU UAC UAGU UCAG CCUAGGAAC CA U
CUCGGCGUAGCCACUUCCC^ G GU - - UC UU GAGUG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-1547_5p |
| mirBase accession | None |
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| Sequence |
0- UAUCAGAGUCUUGGGUCCUUGUGU -24
Get sequence
|
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| Star sequence |
Neu-Mir-1547_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
39- UCAAGGAUCCCUGACUUGAUCA -61
Get sequence
|
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