| MirGeneDB ID | Npo-Mir-12501 |
|---|---|
| Family name | MIR-12501 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Esc-Mir-12501 Obi-Mir-12501 Ovu-Mir-12501 |
| Node of Origin (locus) | Cephalopoda |
| Node of Origin (family) | Cephalopoda |
| Genome context (GCA_018389105_NPO) |
JACATO010000106.1: 1204687-1204744 [+] Ensembl |
| Seed | CGGUCAU |
| Precursor (pre-Mir +30nt flank) |
GAUGUGAUACAGGAUUUAAAUUGAUUGCAACAAGGCAGAUAUAGGACCCGUGUAGACAUAAUGCCGUCGGUCAUAUGUCUGCCUGAUUGCAGUCGAUUUAAAAACCAGCGGUUACGGAGet precursor sequence |
| Structure | 10 20 30 40 50 GAUGUGAUACAGGAUUU--| CA G CG UAGAC AAAUUGAUUGCAA AGGCAGAUAUA GACC UG A UUUAGCUGACGUU UCCGUCUGUAU CUGG GC U AGGCAUUGGCGACCAAAAA^ AG A CU CGUAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Npo-Mir-12501_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAAGGCAGAUAUAGGACCCGUG -22
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|
| Mature sequence | Npo-Mir-12501_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- UCGGUCAUAUGUCUGCCUGAUU -58
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|
