| MirGeneDB ID | Npo-Mir-12505 |
|---|---|
| Family name | MIR-12505 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Esc-Mir-12505 Obi-Mir-12505 Ovu-Mir-12505 |
| Node of Origin (locus) | Cephalopoda |
| Node of Origin (family) | Cephalopoda |
| Genome context (GCA_018389105_NPO) |
JACATO010001118.1: 124861-124918 [+] Ensembl |
| Seed | GGAACAU |
| Precursor (pre-Mir +30nt flank) |
GGAGAGCAGACUCAGCCGCUUACCUCGUCCCCGGGGCCCUUUAUGCUCCGUACUAUUUCAGAGAUACGGAACAUAAUGGCCCCUGGGAACAGGGUGAGUCAUUCGUCGUUAAUACCCGGet precursor sequence |
| Structure | 10 20 30 40 50 GGAGAGCAGACUCAGCC-- UC -| C CU C CUAUU GCUUACC G UCCC GGGGCC UUAUG UCCGUA U UGAGUGG C AGGG CCCCGG AAUAC AGGCAU C GCCCAUAAUUGCUGCUUAC GA A^ U U- A AGAGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Npo-Mir-12505_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCGGGGCCCUUUAUGCUCCGUAC -23
Get sequence
|
| Mature sequence | Npo-Mir-12505_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- CGGAACAUAAUGGCCCCUGGGA -58
Get sequence
|
