| MirGeneDB ID | Npo-Mir-1993 |
|---|---|
| Family name | MIR-1993 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Agr-Mir-1993 Ava-Mir-1993-P10 Ava-Mir-1993-P11 Bko-Mir-1993 Bpl-Mir-1993 Cbr-Mir-1993 Cel-Mir-1993 Csc-Mir-1993 Cte-Mir-1993 Dgr-Mir-1993 Dma-Mir-1993 Dpu-Mir-1993 Eba-Mir-1993 Efe-Mir-1993-P1 Efe-Mir-1993-P2 Egr-Mir-1993 Esc-Mir-1993 Gsa-Mir-1993 Gsp-Mir-1993 Hru-Mir-1993 Isc-Mir-1993 Lan-Mir-1993 Lgi-Mir-1993 Llo-Mir-1993 Lpo-Mir-1993-P3 Lpo-Mir-1993-P4 Lpo-Mir-1993-P5 Mgi-Mir-1993 Mom-Mir-1993 Obi-Mir-1993 Ofu-Mir-1993-P12 Ofu-Mir-1993-P13 Ovu-Mir-1993 Pau-Mir-1993 Pca-Mir-1993 Pcr-Mir-1993-P14 Pcr-Mir-1993-P15 Pdu-Mir-1993 Pve-Mir-1993-P8 Pve-Mir-1993-P9 Rph-Mir-1993 Sma-Mir-1993 Sme-Mir-1993-P6 Sme-Mir-1993-P7 Snu-Mir-1993 Tur-Mir-1993 War-Mir-1993 |
| Node of Origin (locus) | Protostomia |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_018389105_NPO) |
JACATO010000926.1: 735993-736050 [+] Ensembl |
| Seed | AUUAUGC |
| Precursor (pre-Mir +30nt flank) |
AUUUCUACCAGAAAGUGGCUCCUGCAGUUUUCGGGAAUAGCGGCAUAAUGCUGUAAAUUUGGAUCGUAUUAUGCUGUUAUUCACGAGAUUCUCGAGUCAGCAGACGACAAGAGAGUCUGet precursor sequence |
| Structure | 10 20 30 40 50 AUUUCUACCAGAAAGUG----| CUGCAGU G UGUAAA GCUC UUUCG GAAUAGCGGCAUAAUGC U UGAG AGAGC CUUAUUGUCGUAUUAUG U UCUGAGAGAACAGCAGACGAC^ CUCUU-- A CUAGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Npo-Mir-1993_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UCGGGAAUAGCGGCAUAAUGCU -22
Get sequence
|
| Mature sequence | Npo-Mir-1993_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- UAUUAUGCUGUUAUUCACGAGA -58
Get sequence
|
