MirGeneDB 3.0
MirGeneDB ID

Nve-Mir-2028

Family name MIR-2028 (all species)
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID nve-mir-2028
Paralogues
Orthologues Asp-Mir-2028-P1  Asp-Mir-2028-P2a  Asp-Mir-2028-P2b 
Node of Origin (locus) Anenthemonae
Node of Origin (family) Anenthemonae
Genome context
(GCF_000209225.1_ASM20922v1_NVE)		 NW_001834408.1: 334216-334264 [-] Ensembl
Seed AAUGUUC
Precursor
(pre-Mir +30nt flank)		 
AGACAAUGAUGGUGUAGGACGAUGGAGUCUUAAUGUUCCUGCUUGUUCCUAUAUAUUAGGAACUAGCAGGAGCAUUAAGAUUACAGUCGUCAAUAAACACGGAUUACAG
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Structure
        10         20         30        40        50    
AGACAAUGAUGGUGUAG-      GG-|                 U       UA 
                  GACGAU   AGUCUUAAUGUUCCUGCU GUUCCUA  \
                  CUGCUG   UUAGAAUUACGAGGACGA CAAGGAU  U
GACAUUAGGCACAAAUAA      ACA^                 U       UA 
       100        90        80        70        60
Deep sequencing
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CommentThere are Dicer cuts +1 and -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
Ad Ad Bl Ju La Pr
Mature sequence

Nve-Mir-2028_5p
mirBase accessionMIMAT0009776
Sequence 
0- UAAUGUUCCUGCUUGUUCCUAU -22
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Star sequence

Nve-Mir-2028_3p*
mirBase accessionMIMAT0009777
Sequence 
27- AGGAACUAGCAGGAGCAUUAAG -49
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