| MirGeneDB ID | Nve-Mir-9442-P1 |
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| Family name |
MIR-9442 (all species) |
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| Species |
Starlet sea anemone (Nematostella vectensis) |
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| MiRBase ID |
nve-mir-9442
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| Paralogues |
Nve-Mir-9442-P2
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| Orthologues |
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| Node of Origin (locus) |
N. vectensis
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| Node of Origin (family) |
N. vectensis
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Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001834395.1: 1486808-1486856 [-]
Ensembl
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| Seed |
AUAUCAG |
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Precursor
(pre-Mir +30nt flank) |
UCUGCUGAUAGAAUAGGCGGGGUGCCCCGGAAUAUCAGGAGGACGCAUUCGUUUUACGCAUGCGUCCUCGUGAUACUUCCGGUCAUUCCCAAAUGCCACCUCGCAUUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UCUGCUGAUAGAAUAGGC- UGCC -| G U UU
GGGG CCGGAA UAUCA GAGGACGCAU CG \
CCCU GGCCUU AUAGU CUCCUGCGUA GC U
AUUUACGCUCCACCGUAAA UACU C^ G C AU
100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Nve-Mir-9442-P1_5p |
| mirBase accession | MIMAT0035403 |
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| Sequence |
0- AAUAUCAGGAGGACGCAUUCG -21
Get sequence
|
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| Star sequence |
Nve-Mir-9442-P1_3p* |
| mirBase accession | None |
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| Sequence |
28- CAUGCGUCCUCGUGAUACUUC -49
Get sequence
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