| MirGeneDB ID | Oan-Mir-1350 |
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| Family name |
MIR-1350 (all species) |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
oan-mir-1350
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041749.1: 106749864-106749924 [+]
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| Seed |
GUCAACU |
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Precursor
(pre-Mir +30nt flank) |
CAAACAAACCCAAAACUGGCCUGUGCUGUCUGGGAGAGGUCCCCAGGUGGCAAUGGGCAGUAUGUUUCCUGUCAACUGGGUCUCUCCUAGAUAGGGGAAGCCACUCCCAGCUCAGAAGGGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CAAACAAACCCAAAACU--| CUGUG UC G AU GCAGU
GGC CUGUCUGGGAGAGG CCCAG UGGCA GG \
CCG GAUAGAUCCUCUCU GGGUC ACUGU CC A
CGGGAAGACUCGACCCUCA^ AAGGG -- A -- UUUGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Oan-Mir-1350_5p* |
| mirBase accession | MIMAT0006940 |
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| Sequence |
0- UGGGAGAGGUCCCCAGGUGGCAAUGG -26
Get sequence
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| Mature sequence |
Oan-Mir-1350_3p |
| mirBase accession | None |
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| Sequence |
39- UGUCAACUGGGUCUCUCCUAGA -61
Get sequence
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