| MirGeneDB ID | Oan-Mir-1381 |
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| Family name |
MIR-1381 (all species) |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
oan-mir-1381
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041741.1: 18817132-18817194 [+]
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| Seed |
CCCUCGC |
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Precursor
(pre-Mir +30nt flank) |
GCGGGCACGCACCAUUUCCAGUGGGUUGCCUCCCUCGCCCCCUCUCCGGAGCCGUCCCCUCUGACUCACCGGUACGGGAGGUUGCGAGGUUCGCAGCUCGGGCUGGAAUAAGAAAGAUUUCUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCGGGCACGCACCAUUUC --| CUC CC U GA CGUCCCCUC
CAGU GGGUUGC CCUCGC CCUC CCG GC \
GUCG CUCGACG GGAGCG GGAG GGC UG U
UUCUUUAGAAAGAAUAAG GG^ CUU UU - A- GCCACUCAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Oan-Mir-1381_5p |
| mirBase accession | MIMAT0007120 |
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| Sequence |
0- UCCCUCGCCCCCUCUCCGGAGC -22
Get sequence
|
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| Star sequence |
Oan-Mir-1381_3p* |
| mirBase accession | MIMAT0007121 |
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| Sequence |
41- GUACGGGAGGUUGCGAGGUUCG -63
Get sequence
|
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