| MirGeneDB ID | Oan-Mir-1401 |
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| Family name |
MIR-1401 (all species) |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
oan-mir-1401
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041750.1: 23137729-23137791 [+]
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| Seed |
UUCUGAC |
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Precursor
(pre-Mir +30nt flank) |
CUAGUUCCUGAGGUCAUGCGAGGAUAGCUGUUUCUGACCACCACCGGCCUCUUCCUUCCCAUCAGUGUUAGAGGCCAAUGGCAGUCAGAAAUGGCUCGCCUUGGCUCUCUGCAAGAAACGUGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CUAGUUCCUGAGGUCAUG--| AU CA CC UCCUUCCC
CGAGG AGCUGUUUCUGAC CCA GGCCUCU \
GUUCC UCGGUAAAGACUG GGU CCGGAGA A
GGUGCAAAGAACGUCUCUCG^ GC AC AA UUGUGACU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Oan-Mir-1401_5p |
| mirBase accession | MIMAT0007207 |
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| Sequence |
0- UUUCUGACCACCACCGGCCUCU -22
Get sequence
|
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| Star sequence |
Oan-Mir-1401_3p* |
| mirBase accession | MIMAT0007208 |
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| Sequence |
41- AGGCCAAUGGCAGUCAGAAAUG -63
Get sequence
|
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