| MirGeneDB ID | Oan-Novel-6 |
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| Family name |
OAN-NOVEL-6 (all species) |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041729.1: 49166166-49166232 [-]
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| Seed |
AGUAAAG |
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Precursor
(pre-Mir +30nt flank) |
AGUUGAGGCCCAGAGAGGUUGAGUGCUUGCUCCGUGCAGAGCACUAUACUAAGUGUACCAUACAACCCAAAGCUUAGUAAAGUACUCUGCGCAUGGUAAGCGCUCAAUAAAUGCCACUGAUGGAUGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AGUUGAGGCCCAGAGAG--| CC C A UGUACCAUA
GUUGAGUGCUUGCU GUGCAGAG ACU UACUAAG \
UAACUCGCGAAUGG CGCGUCUC UGA AUGAUUC C
UGUAGGUAGUCACCGUAAA^ UA A A GAAACCCAA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Star sequence |
Oan-Novel-6_5p* |
| mirBase accession | None |
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| Sequence |
0- UCCGUGCAGAGCACUAUACUAAG -23
Get sequence
|
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| Mature sequence |
Oan-Novel-6_3p |
| mirBase accession | None |
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| Sequence |
44- UAGUAAAGUACUCUGCGCAUGGU -67
Get sequence
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