| MirGeneDB ID | Obi-Mir-12507 |
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| Family name |
MIR-12507 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Mir-12507
Npo-Mir-12507
Ovu-Mir-12507
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(PRJNA270931_OBI) |
KQ428200: 264164-264224 [+]
Ensembl
|
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| Seed |
UGGCGGA |
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Precursor
(pre-Mir +30nt flank) |
AUGCUGACCAACAACUAGCACUGCAAGAGUGGUGGGCAACAAUUCCACCAGGACUGUCCCACCGUCCUCCUGGCGGAUUUGAUGCCACGGCGAAUGCAGCUGCUCCGGGAAUUCACAGAAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUGCUGACCAACAACUA- -| AGA G G A U A CUGUCC
GCA CUGCA GU GUGG CA CAA UCC CCAGGA C
CGU GACGU CG CACC GU GUU AGG GGUCCU A
GAAGACACUUAAGGGCCU C^ AAG G - A U C CCUGCC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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| Star sequence |
Obi-Mir-12507_5p* |
| mirBase accession | None |
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| Sequence |
0- GGUGGGCAACAAUUCCACCAGGA -23
Get sequence
|
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| Mature sequence |
Obi-Mir-12507_3p |
| mirBase accession | None |
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| Sequence |
39- CUGGCGGAUUUGAUGCCACGGC -61
Get sequence
|
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