MirGeneDB 3.0
MirGeneDB ID

Obi-Mir-12539

Family name MIR-12539 (all species)
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12539  Ovu-Mir-12539 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)		 KQ416908: 293135-293208 [-] Ensembl
Seed CUGUGCA
Precursor
(pre-Mir +30nt flank)		 
UGAAGUCACAGAGUAAACCAAUUAAAGUGCCCUGUGCAAAGAGUCGUUAAGCUGUUCUAGCCAUACUUCCAAAUGACUGGCUUAGCAACUUCAUUGCAUGGAGUUCUUCCUUUGGUGCUGACACCACCCACAAG
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Structure
        10          20        30        40         50        60      
UGAAGUCACAGAGUAAA--    UUA   U  C        A-|   C       UGUUCUAGCCAUA 
                   CCAA   AAG GC CUGUGCAA  GAGU GUUAAGC             \
                   GGUU   UUC UG GGUACGUU  UUCA CGAUUCG             C
GAACACCCACCACAGUCGU    UCC   U  A        AC^   A       GUCAGUAAACCUU 
  130       120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Mature sequence

Obi-Mir-12539_5p
mirBase accessionNone
Sequence 
0- CCUGUGCAAAGAGUCGUUAAGC -22
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Star sequence

Obi-Mir-12539_3p*
mirBase accessionNone
Sequence 
51- UUAGCAACUUCAUUGCAUGGAGU -74
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