MirGeneDB 3.0
MirGeneDB ID

Obi-Mir-12543

Family name MIR-12543 (all species)
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12543  Ovu-Mir-12543 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)		 KQ423250: 221872-221930 [+] Ensembl
Seed ACCAAAG
Precursor
(pre-Mir +30nt flank)		 
GAAGGAGCGGUCUGUUUCAGCUUGGGGUUUUCUCCAACUAGUUUUCGGUACCUUGUGUUUCAUUAUGGUACCAAAGAUGAUUGGAGAGAUCCCCCACAGUUGACUUAUCAUCGAUUACU
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Structure
        10        20          30        40        50         
GAAGGAGCGGUCUGUUUC    -     U-|        CUA     C      UUGUGU 
                  AGCU UGGGG  UUUCUCCAA   GUUUU GGUACC      U
                  UUGA ACCCC  AGAGAGGUU   UAGAA CCAUGG      U
UCAUUAGCUACUAUUCAG    C     CU^        AG-     A      UAUUAC 
       110       100        90        80         70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms. This second cut on the 5p arm corresponds to the mature read in O. Vulgaris.
3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Obi-Mir-12543_5p*
mirBase accessionNone
Sequence 
0- UCUCCAACUAGUUUUCGGUACC -22
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Mature sequence

Obi-Mir-12543_3p
mirBase accessionNone
Sequence 
38- UACCAAAGAUGAUUGGAGAGA -59
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