MirGeneDB 3.0
MirGeneDB ID

Obi-Mir-12544

Family name MIR-12544 (all species)
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12544  Ovu-Mir-12544 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)		 KQ420117: 148072-148130 [-] Ensembl
Seed ACGCGUU
Precursor
(pre-Mir +30nt flank)		 
GCUACCUUAAGCUGAAUGCAGAUUGCAAAUAGCUGGAAGCUGAAGGCGCCAUGAUUGUUAGGUAAACAACGCGUUCCGCUUUCAGUCUUUUGCAAUCAGCCUUUGUCAUCACAAGAACC
Get precursor sequence
Structure
        10          20        30        40        50         
GCUACCUUAAGCUGAAU--| A         UA         U   G   CCAUGAUUGU 
                   GC GAUUGCAAA  GCUGGAAGC GAA GCG          \
                   CG CUAACGUUU  UGACUUUCG CUU CGC          U
CCAAGAACACUACUGUUUC^ A         UC         C   G   AACAAAUGGA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Obi-Mir-12544_5p*
mirBase accessionNone
Sequence 
0- AGCUGGAAGCUGAAGGCGCCAU -22
Get sequence
Mature sequence

Obi-Mir-12544_3p
mirBase accessionNone
Sequence 
37- AACGCGUUCCGCUUUCAGUCUU -59
Get sequence