| MirGeneDB ID | Obi-Mir-12564 |
|---|
| Family name |
MIR-12564 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Mir-12564
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ416604: 90777-90835 [-]
Ensembl
|
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| Seed |
GGGUGAG |
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Precursor
(pre-Mir +30nt flank) |
GGUAUGAAACAGUAUGUAACCUGCUAACUCUCACUAACAUGUCUCAUCUACUGGCUUACAAAUCCAGUGGGUGAGAUCUGUUAAUGAGAGAGAGAGAGUUUGCAAGCAGCCACACAAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGUAUGAAACAGUAUGU-- -| G AA C U GGCUUA
AAC CU CU CUCUCA UAACA GUCUCAUCUACU \
UUG GA GA GAGAGU AUUGU UAGAGUGGGUGA C
CUAACACACCGACGAACGU A^ - GA A C CCUAAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12564_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCACUAACAUGUCUCAUCUACU -22
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12564_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UGGGUGAGAUCUGUUAAUGAGA -59
Get sequence
|
|---|
