| MirGeneDB ID | Obi-Mir-12572 |
|---|
| Family name |
MIR-12572 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Mir-12572
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ418087: 407333-407393 [-]
Ensembl
|
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| Seed |
AUCUCAU |
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Precursor
(pre-Mir +30nt flank) |
UCAUUGAAGAGAAAGGAGAUCGGAAACACUUCUCAUGUGUACAUUGAGACGUUUUGAACAUCUGAAAACAUCUCAUGUCUACAUAGAGACGUGUUGAGGGUCAAUACUGAACGGAUAUAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCAUUGAAGAGAAAGGA-- GGA U -| U U C UUGAAC
GAUC AACAC UCUC AUGUG ACAU GAGA GUU \
CUGG UUGUG AGAG UACAU UGUA CUCU CAA A
UUAUAUAGGCAAGUCAUAA GAG C A^ C - A AAGUCU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12572_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- UCUCAUGUGUACAUUGAGACGUU -23
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12572_3p |
| mirBase accession | None |
|---|
| Sequence |
38- CAUCUCAUGUCUACAUAGAGACG -61
Get sequence
|
|---|
