| MirGeneDB ID | Obi-Mir-12579 |
|---|
| Family name |
MIR-12579 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Mir-12579
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ415811: 909644-909701 [-]
Ensembl
|
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| Seed |
CAGUCGG |
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Precursor
(pre-Mir +30nt flank) |
CACGCACCGCCAUAGCUAUCUCGUUUAGCCAGUUUUAUUUGGUCCUGAUUGUUGUUCAGUCGGGGUACAGUCGGUCAAAUAAAGCUGGUUACACGAAACCUUUCCAUAUCAAUUUCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CACGCACCGCCAUAGCUAUC--| U U U UGUUCA
UCGU UAGCCAGUUUUAUUUGG CC GAUUGU G
AGCA AUUGGUCGAAAUAAACU GG CUGACA U
CUCUUUAACUAUACCUUUCCAA^ C - - UGGGGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12579_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGUUUUAUUUGGUCCUGAUUGUUG -24
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12579_3p |
| mirBase accession | None |
|---|
| Sequence |
36- ACAGUCGGUCAAAUAAAGCUGG -58
Get sequence
|
|---|
