MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-146-P1

Family name MIR-146 (all species)
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-146b
Paralogues Ocu-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chr18: 50441898-50441957 [+] UCSC Ensembl
Seed GAGAACU
Precursor
(pre-Mir +30nt flank)		 
AAAGGUGCAAGGACUUUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGCACCAUCUGUGCCAAG
Get precursor sequence
Structure
        10        20          30        40        50        60
AAAGGUGCAAGGACUUUG  -  -| U   U  G        A    A    C   GAGCU 
                  GC CA CC GGC CU AGAACUGA UUCC UAGG CGU     C
                  CG GU GG CCG GG UCUUGACU AGGG GUCC GUA     U
GAACCGUGUCUACCACGU  U  C^ C   U  -        C    -    C   AACGA 
.       110       100        90         80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
He Ki Te To Wh
Mature sequence

Ocu-Mir-146-P1_5p
mirBase accessionMIMAT0048255
Sequence 
0- UGAGAACUGAAUUCCAUAGGCCGU -24
Get sequence
Star sequence

Ocu-Mir-146-P1_3p* (predicted)
mirBase accessionMIMAT0048256
Sequence 
38- GCCCUGGGGACUCAGUUCUGGU -60
Get sequence