| MirGeneDB ID | Ofu-Novel-8 |
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| Family name |
OFU-NOVEL-8 (all species) |
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| Species |
Tubeworm (Owenia fusiformis) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. fusiformis
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| Node of Origin (family) |
O. fusiformis
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Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000058.1: 48082-48148 [+]
|
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| Seed |
GUCCUAG |
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Precursor
(pre-Mir +30nt flank) |
GAGCCUAGUGAUAAUCUAUACAUUUGUAUUCCCUUUGACUUACUAUGGACAGUCAGCUUGCAAGAGGUCUCAGACUGUCCUAGUGGGUUGAAGGCUUCACAGGUGUACUUGCCAGCAUCACUAGGGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GAGCCUAGUGAUAAUCUA--| AUUC UG U CAGCUUGCA
UACAUUUGU CCUU ACUUACUA GGACAGU A
AUGUGGACA GGAA UGGGUGAU CCUGUCA G
AGGGAUCACUACGACCGUUC^ CUUC GU - GACUCUGGA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Ofu-Novel-8_5p* |
| mirBase accession | None |
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| Sequence |
0- CCCUUUGACUUACUAUGGACAGU -23
Get sequence
|
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| Mature sequence |
Ofu-Novel-8_3p |
| mirBase accession | None |
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| Sequence |
45- UGUCCUAGUGGGUUGAAGGCUU -67
Get sequence
|
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