| MirGeneDB ID | Pab-Mir-1914 |
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| Family name |
MIR-1914 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hsa-Mir-1914
|
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| Node of Origin (locus) |
Catarrhini
|
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| Node of Origin (family) |
Catarrhini
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054700.2: 68408966-68409023 [-]
UCSC
Ensembl
|
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| Seed |
CCUGUGC |
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Precursor
(pre-Mir +30nt flank) |
GUAUGAGACCUAUCAGCACGUGUGAGCCCGCCCUGUGCCCGUCCCACUUCUGCUGCUGCUUAGCUCAGGAGGGGUCCCGCACUGGGAGGGGCCCUCACACCCUACCCCCCCUAGCUUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GUAUGAGACCUAUCAGCAC -- G-| U CCGU A CUGCUG
GUGUGA GCCC CCC GUGC CCC CUUCUG \
CACACU CGGG GGG CACG GGG GAGGAC C
UUUCGAUCCCCCCCAUCC- CC GA^ U CCCU - UCGAUU
110 100 90 80 70 60 |
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| Deep sequencing |
|
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| Comment | Although absent in M. mulatta this locus is present in other old world monkeys. |
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Pab-Mir-1914_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- CCCUGUGCCCGUCCCACUUCUGC -23
Get sequence
|
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| Star sequence |
Pab-Mir-1914_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
36- AGGAGGGGUCCCGCACUGGGAG -58
Get sequence
|
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