| MirGeneDB ID | Pab-Mir-3174 |
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| Family name |
MIR-3174 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Hsa-Mir-3174
Mml-Mir-3174
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| Node of Origin (locus) |
Catarrhini
|
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| Node of Origin (family) |
Catarrhini
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054695.2: 93090431-93090500 [+]
UCSC
Ensembl
|
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| Seed |
AGUGAGU |
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Precursor
(pre-Mir +30nt flank) |
GGUCCAUGGACCAGCAUCAGCGUUACCUGGUAGUGAGUUAGAGAUGCAGAGCCCUGGGCUCCUCAGCAAACCUACUGGAUCUGCAUUUUAAUUCACAUGCAUGGUAAUGUCUGUAAAGCACUGAUGGACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GGUCCAUGGACCAGCAUCA- UG -| A G CUGGGCUCCUC
GCGUUACC GUA GUGAGUU GAGAUGCAGA CC \
UGUAAUGG CGU CACUUAA UUUUACGUCU GG A
UCAGGUAGUCACGAAAUGUC UA A^ - A UCAUCCAAACG
. 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-3174_5p |
| mirBase accession | None |
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| Sequence |
0- UAGUGAGUUAGAGAUGCAGAGCC -23
Get sequence
|
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| Star sequence |
Pab-Mir-3174_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
48- AUCUGCAUUUUAAUUCACAUGC -70
Get sequence
|
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