| MirGeneDB ID | Sha-Mir-12472 |
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| Family name |
MIR-12472 (all species) |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mdo-Mir-12472
Neu-Mir-12472
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL861720.1: 466102-466156 [+]
UCSC
Ensembl
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| Seed |
CCCCCGG |
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Precursor
(pre-Mir +30nt flank) |
GGGACGGAAGGCGGAAGCGGAGCGUGAGCGGGAGGCCGAGCCGGGGGAGCGGCUCUCGUAGCUCCCCCGGGCUCCGGACCUCGCAGGAAGGAGGGCGUUACCGCCGCUGCCUGGU
Get precursor sequence
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| Structure | 10 20 30 40 50
GGGACGGAAGGCGGAAGCGGAGCGUGA---- AGG - -| GGCU
GCGGG CC GAG CCGGGGGAGC C
CGCUC GG CUC GGCCCCCUCG U
UGGUCCGUCGCCGCCAUUGCGGGAGGAAGGA CA- C G^ AUGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Star sequence |
Sha-Mir-12472_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- GGAGGCCGAGCCGGGGGAGC -20
Get sequence
|
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| Mature sequence |
Sha-Mir-12472_3p |
| mirBase accession | None |
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| Sequence |
32- UCCCCCGGGCUCCGGACCUCGCA -55
Get sequence
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