| MirGeneDB ID | Spt-Mir-383 |
|---|---|
| Family name | MIR-383 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-383-v1 Ami-Mir-383-v1 Bta-Mir-383-v1 Cfa-Mir-383-v1 Cja-Mir-383-v1 Cli-Mir-383-v1 Cpi-Mir-383-v1 Cpo-Mir-383-v1 Dno-Mir-383-v1 Eca-Mir-383-v1 Ete-Mir-383-v1 Gga-Mir-383-v1 Gja-Mir-383-v1 Hsa-Mir-383-v1 Laf-Mir-383-v1 Mdo-Mir-383-v1 Mml-Mir-383-v1 Mmr-Mir-383-v1 Mmu-Mir-383-v1 Mun-Mir-383 Oan-Mir-383-v1 Ocu-Mir-383-v1 Pab-Mir-383-v1 Pbv-Mir-383-v1 Rno-Mir-383-v1 Sha-Mir-383-v1 Tgu-Mir-383-v1 Xla-Mir-383-P1 Xla-Mir-383-P2 Xtr-Mir-383-v1 |
| Node of Origin (locus) | Tetrapoda |
| Node of Origin (family) | Tetrapoda |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01007949.1: 831381-831442 [+] UCSC Ensembl |
| Seed | GAUCAGA |
| Precursor (pre-Mir +30nt flank) |
ACAAGAGAACCUUCCAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGAGUAGCUAAUAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUGCCUCCUGet precursor sequence |
| Structure | 10 20 30 40 50 60 ACAAGAGAACCUUCCAGU- C C-| A AA A UUGAGUAG CAC UGCUC UC GAUCAG GGUG UUGUGGCU \ GUG ACGAG AG CUGGUC UCAC GACACCGA C UCCUCCGUUUUCCGAUCAU A AA^ A CG - CGAAUAAU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Spt-Mir-383_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AGAUCAGAAGGUGAUUGUGGCU -22
Get sequence
|
| Star sequence | Spt-Mir-383_3p* (predicted) |
| mirBase accession | None |
| Sequence |
41- CCACAGCACUGCCUGGUCAGA -62
Get sequence
|
