| MirGeneDB ID | Tca-Mir-11630 |
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| Family name |
MIR-11630 (all species) |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-11630
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
T. castaneum
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| Node of Origin (family) |
T. castaneum
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Genome context
(Tcas5.2) |
LGX: 3971241-3971303 [-]
Ensembl
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| Seed |
UCAAAUU |
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Precursor
(pre-Mir +30nt flank) |
CGCUGCUCCUGCCAGCUACUGGUCUAUUAGUCAGAUAUGGGUGGAAUGGUGAUGGUAAUCAUGAACACCCAUCAAAUUCAGUUAUGUCUGGCUGGAUACCAGUCUAUGACACAAUGCACGGCA
Get precursor sequence
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| Structure | 10 20 30 40 50 60
CGCUGCUCCUGCCAGCU---| CUA G AUGG UAAUCA
ACUGGU UUAGUCAGAUAUGG UGGA UGAUGG \
UGACCA GGUCGGUCUGUAUU ACUU ACUACC U
ACGGCACGUAACACAGUAUC^ UA- G AA-- CACAAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Star sequence |
Tca-Mir-11630_5p* |
| mirBase accession | MIMAT0045552 |
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| Sequence |
0- UCAGAUAUGGGUGGAAUGGUGAUGG -25
Get sequence
|
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| Mature sequence |
Tca-Mir-11630_3p |
| mirBase accession | MIMAT0045553 |
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| Sequence |
40- AUCAAAUUCAGUUAUGUCUGGCU -63
Get sequence
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