| MirGeneDB ID | Tca-Mir-14 |
|---|
| Family name |
MIR-14 (all species) |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-14
|
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| Paralogues |
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| Orthologues |
Aae-Mir-14
Aga-Mir-14
Bge-Mir-14
Dan-Mir-14
Dlo-Mir-14
Dme-Mir-14
Dmo-Mir-14
Dsi-Mir-14
Dya-Mir-14
Gpa-Mir-14
Hme-Mir-14
|
|---|
| Node of Origin (locus) |
Neoptera
|
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| Node of Origin (family) |
Neoptera
|
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Genome context
(Tcas5.2) |
LG3: 2833776-2833833 [+]
Ensembl
|
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| Seed |
CAGUCUU |
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Precursor
(pre-Mir +30nt flank) |
GAACCGAACCGACGACUCCAAUGGGUGAACAGGGGAGCGGAUUGGACUUACUUUUUUUCAAACAGUCAGUCUUUUUCUCUCUCCUAUUAAUCCAUUCGAUUUCCAACUCGCCGACUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAACCGAACCGACGACU---|C G C C UU U UUUUU
C AAUGGGU AA AGGGGAG GGA GGACU ACU \
G UUACCUA UU UCCUCUC CUU UCUGA UGA U
UAUCAGCCGCUCAACCUUUA^C A A U UU C CAAAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Star sequence |
Tca-Mir-14_5p* |
| mirBase accession | MIMAT0019105 |
|---|
| Sequence |
0- AGGGGAGCGGAUUGGACUUACU -22
Get sequence
|
|---|
| Mature sequence |
Tca-Mir-14_3p |
| mirBase accession | MIMAT0008361 |
|---|
| Sequence |
35- UCAGUCUUUUUCUCUCUCCUAUU -58
Get sequence
|
|---|
