| MirGeneDB ID | Tca-Mir-3853 |
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| Family name |
MIR-3853 (all species) |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-3853
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
T. castaneum
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| Node of Origin (family) |
T. castaneum
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Genome context
(Tcas5.2) |
LG5: 5943323-5943381 [-]
Ensembl
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| Seed |
UGUGUAU |
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Precursor
(pre-Mir +30nt flank) |
AUUUCAUGAAAAAAUAUCCUUGUGCAUCUUGUGUGUAUUUUGUGAAAUGCUAUAGUUGAAUAUUUUAGUUUUUUUCAAAAUAUGCUCAUAAUGUGCAAGGGUGAUUUGUUAUCGGUUGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUUUCAUGAAAAAAUAU--| UG CU U U U UAGUUG
CCUUG CAU UG GUGUAUUUUG GAAA GCUA \
GGAAC GUA AC CGUAUAAAAC UUUU UGAU A
GGUUGGCUAUUGUUUAGUG^ GU AU U U U UUUAUA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Mature sequence |
Tca-Mir-3853_5p |
| mirBase accession | MIMAT0018762 |
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| Sequence |
0- GUGUGUAUUUUGUGAAAUGCUA -22
Get sequence
|
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| Star sequence |
Tca-Mir-3853_3p* |
| mirBase accession | MIMAT0018763 |
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| Sequence |
37- GUUUUUUUCAAAAUAUGCUCAU -59
Get sequence
|
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