MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-218-P2

Family name MIR-218 (all species)
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-218a-2
Paralogues Tni-Mir-218-P3  Tni-Mir-218-P4 
Orthologues Aca-Mir-218-P2  Ami-Mir-218-P2  Bta-Mir-218-P2  Cfa-Mir-218-P2  Cja-Mir-218-P2  Cli-Mir-218-P2  Cmi-Mir-218-P2  Cpi-Mir-218-P2  Cpo-Mir-218-P2  Dno-Mir-218-P2  Dre-Mir-218-P2  Eca-Mir-218-P2  Ete-Mir-218-P2  Gga-Mir-218-P2  Gja-Mir-218-P2  Gmo-Mir-218-P2  Hsa-Mir-218-P2  Laf-Mir-218-P2  Lch-Mir-218-P2  Loc-Mir-218-P2  Mal-Mir-218-P2  Mdo-Mir-218-P2  Mml-Mir-218-P2  Mmr-Mir-218-P2  Mmu-Mir-218-P2  Mun-Mir-218-P2  Neu-Mir-218-P2  Oan-Mir-218-P2  Ocu-Mir-218-P2  Pab-Mir-218-P2  Pbv-Mir-218-P2  Pma-Mir-218-o2  Rno-Mir-218-P2  Sha-Mir-218-P2  Spt-Mir-218-P2  Sto-Mir-218-P2  Tgu-Mir-218-P2  Xla-Mir-218-P2a  Xla-Mir-218-P2b  Xtr-Mir-218-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 18: 234311-234377 [+] UCSC Ensembl
Seed UGUGCUU
Precursor
(pre-Mir +30nt flank)		 
GGAGGAGCAGUCAGUCAGCAGGUUGUUCCUUUGUGCUUGAUCUAACCAUGUGGCUGCCAGGUUCUUAUCGUGGAACAUGGUUCUGUCAAGCACCAUGGAACGGCCCUGCGAAAGCCUACAGCAUGGC
Get precursor sequence
Structure
        10         20         30        40        50        60   
GGAGGAGCAGUCAGUCA-   -|        UUU         CU        GGCUGCCAGGU 
                  GCA GGUUGUUCC   GUGCUUGAU  AACCAUGU           \
                  CGU CCGGCAAGG   CACGAACUG  UUGGUACA           U
CGGUACGACAUCCGAAAG   C^        UAC         UC        AGGUGCUAUUC 
     120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
- +
Sp Sp Sp To
Mature sequence

Tni-Mir-218-P2_5p
mirBase accessionMIMAT0002994
Sequence 
0- UUGUGCUUGAUCUAACCAUGUG -22
Get sequence
Star sequence

Tni-Mir-218-P2_3p* (predicted)
mirBase accessionNone
Sequence 
45- CAUGGUUCUGUCAAGCACCAUG -67
Get sequence