MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-12482

Family name MIR-12482 (all species)
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID
Paralogues
Orthologues Xla-Mir-12482-P1  Xla-Mir-12482-P2 
Node of Origin (locus) Xenopus
Node of Origin (family) Xenopus
Genome context
(xenTro9_add)		 chr1: 98200860-98200928 [+] UCSC Ensembl
Seed UUCCUGC
Precursor
(pre-Mir +30nt flank)		 
UUACUGCUUAAGAUAUUUUGGGGUUUUGCAGGAUUUCACAUUGCAGGAAGCAAUGGGCUCCAAUAUAUAAAAUAAUGUUUCCUGCAGUGUGACAUCCUGCAAGAUCCUGAGUAAGCUUCAUCUUUGCUG
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Structure
        10          20        30        40        50        60    
UUACUGCUUAAGAUAUU--|UG              U                 AUGGGCUCCAA 
                   U  GGGUUUUGCAGGAU UCACAUUGCAGGAAGCA           \
                   A  CCUAGAACGUCCUA AGUGUGACGUCCUUUGU           U
GUCGUUUCUACUUCGAAUG^GU              C                 AAUAAAAUAUA 
       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An Br Em Em He Ve
Star sequence

Xtr-Mir-12482_5p*
mirBase accessionNone
Sequence 
0- GGAUUUCACAUUGCAGGAAGCA -22
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Mature sequence

Xtr-Mir-12482_3p
mirBase accessionNone
Sequence 
47- UUUCCUGCAGUGUGACAUCCUG -69
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